Information for 2-KCGGGGCTGTGCTACG (Motif 2)

A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
Reverse Opposite:
A T G C C T A G G A C T C T G A A C T G T A G C C G T A T A G C C T G A A C T G A T G C A G T C G A T C A G T C C A T G T G A C
p-value:1e-12
log p-value:-2.877e+01
Information Content per bp:1.685
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.3 +/- 30.1bp
Average Position of motif in Background48.1 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KCGGGGCTGTGCTACG
--GGGGATTTCC----
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:KCGGGGCTGTGCTACG
------CTGTTCCTGG
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:KCGGGGCTGTGCTACG
-GGGGGCGGGGCC---
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:KCGGGGCTGTGCTACG
--GGGGATTTCC----
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:KCGGGGCTGTGCTACG
AGGGGGATTAGCTGCC
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:KCGGGGCTGTGCTACG
--GGGAATTTCC----
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:KCGGGGCTGTGCTACG
-NGGGGATTTCCC---
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:KCGGGGCTGTGCTACG
-MKGGGYGTGGCC---
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:KCGGGGCTGTGCTACG
--GGGAATTTCC----
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:KCGGGGCTGTGCTACG
--GGGGGTGTGTCC--
 A C T G G T A C T C A G C A T G C T A G T A C G G T A C A G C T A T C G C G A T A T C G A G T C A G C T C G T A G A T C A T C G
A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T