Information for 6-GGGATGCCTGACA (Motif 15)

A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G C G A T A G T C C G T A A C T G A C T G A T G C C G T A A C G T G T A C A G T C A G T C
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.6 +/- 13.7bp
Average Position of motif in Background47.0 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.69
Offset:7
Orientation:forward strand
Alignment:GGGATGCCTGACA-
-------TTGACAG
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGATGCCTGACA--
---BTGABTGACAGS
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGATGCCTGACA--
---NTGATTGACAGN
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GGGATGCCTGACA--
-----VGCTGWCAVB
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGGATGCCTGACA---
----TGAGTGACAGSC
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GGGATGCCTGACA-
------RHTGWCAR
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GGGATGCCTGACA--
-------TTGACAGG
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGGATGCCTGACA
-----ARNTGACA
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.62
Offset:7
Orientation:forward strand
Alignment:GGGATGCCTGACA--
-------TTGACAGC
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGGATGCCTGACA
-----NCGTGACN
 A C T G A C T G A C T G T G C A A C G T A T C G G T A C G T A C A C G T A C T G C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T