Information for 9-CCAGGATTCAAGCCTT (Motif 13)

A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
Reverse Opposite:
G C T A C G T A A C T G T A C G A G T C A G C T A C G T A T C G C G T A G T C A A G C T G A T C G T A C C G A T C T A G C T A G
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 23.4bp
Average Position of motif in Background52.2 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAGGATTCAAGCCTT
GGCGAGGGGTCAAGGGC-
 A C G T A C G T A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGATTCAAGCCTT
NTNNNGGGGTCANGNNN-
 A C G T A C G T A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCAGGATTCAAGCCTT
CTCCAGGGGTCAATTGA-
 A C G T A C G T A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CCAGGATTCAAGCCTT
------TTCCCGCCWG
 A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCAGGATTCAAGCCTT--
---AAGTTCAAGGTCAGC
 A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CCAGGATTCAAGCCTT
------TTCACACCTT
 A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CCAGGATTCAAGCCTT
-------CNAGGCCT-
 A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CCAGGATTCAAGCCTT
--AGRGGTCA------
 A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CCAGGATTCAAGCCTT
-CTGGCAGNCTGCCA-
 A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CCAGGATTCAAGCCTT
------NTCAAGGTCA
 A G T C A G T C C G T A A C T G C A T G T C G A C A G T G A C T A T G C G T C A C T G A A C T G A T G C A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A