Information for 1-KGGATCGGTACCAATC (Motif 1)

A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
Reverse Opposite:
T C A G C G T A A C G T G A C T C T A G A T C G G A C T C G T A G T A C G T A C C T A G C T G A C A G T A T G C A G T C G T A C
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.699
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 17.1bp
Average Position of motif in Background38.2 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--KGGATCGGTACCAATC
CTTGGCANNNTGCCAA--
 A C G T A C G T A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KGGATCGGTACCAATC
TTGGCATGGTGCCA---
 A C G T A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:KGGATCGGTACCAATC
------GGTGCCAAGT
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:KGGATCGGTACCAATC
-------ATGCCAACC
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KGGATCGGTACCAATC-
---TTATGTACTAATAA
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C A C G T
A C G T A C G T A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:KGGATCGGTACCAATC----
----ACTATGCCAACCTACC
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:KGGATCGGTACCAATC
------CGTGCCAAG-
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:KGGATCGGTACCAATC
--------TGCCAA--
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KGGATCGGTACCAATC
TGGCAGNCTGCCAG--
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KGGATCGGTACCAATC--
---AAATGGACCAATCAG
 A C T G C T A G A T C G G C T A G A C T G A T C A C T G A C T G A C G T C T G A A T G C A G T C C G T A G T C A C G A T A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G