Information for 5-TTTATGAGCBCTT (Motif 7)

A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G T A G C A C T G A G T C A C G T A G T C C G T A C G A T G T C A C G T A C G T A
p-value:1e-10
log p-value:-2.319e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.8 +/- 23.4bp
Average Position of motif in Background31.5 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGAGCBCTT
NAATTTTACGAGNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGAGCBCTT
NTTTTACGAGN----
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTATGAGCBCTT
TTTTATKRGG----
 A C G T A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTATGAGCBCTT----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGAGCBCTT
ANATTTTACGAGNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTATGAGCBCTT----
-CTTTAAGTACTTAATG
 A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGAGCBCTT
TTTTATTRGN----
 A C G T A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTTATGAGCBCTT-----
-TTTTAAGTACTTAAATT
 A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGAGCBCTT
NAATTTTATTACCTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTATGAGCBCTT----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T G C T A A C G T C T A G C G T A A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A