Information for 1-GAGTTTGCTA (Motif 6)

A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A
Reverse Opposite:
G C A T C G T A T C A G A G T C G T C A C G T A T C G A T A G C A G C T T A G C
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.681
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif234.9
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets42.6 +/- 23.0bp
Average Position of motif in Background52.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGTTTGCTA-----
NNCGTTGCTATGGNN
 A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGTTTGCTA-----
NCCGTTGCTANGNGN
 A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAGTTTGCTA--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAGTTTGCTA---------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GAGTTTGCTA
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGTTTGCTA
GGGAATTTCC--
 A C G T A C G T A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGTTTGCTA-----
NCNTTTGTTATTTNN
 A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGTTTGCTA--------
--ACTTGCTACCTACACC
 A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGTTTGCTA
AAGCTTG---
 A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTTGCTA
GGGAATTTCC--
 A C G T A C G T A T C G C T G A A T C G A G C T G C A T A C G T T C A G A G T C G C A T C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T