Information for 1-CHHTCTGTGCHCTCCT (Motif 5)

A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T
Reverse Opposite:
C G T A T C A G A C T G C G T A A T C G C A T G T C A G A G T C C G T A T G A C C G T A C A T G T C G A C T G A C G T A A T C G
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.730
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 21.7bp
Average Position of motif in Background57.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CHHTCTGTGCHCTCCT-
NTNTATGTGCACATNNN
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CHHTCTGTGCHCTCCT
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CHHTCTGTGCHCTCCT-
NNGTATGTGCACATNNN
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CHHTCTGTGCHCTCCT
TNNTCCTTTGTTCTNNT
 A C G T A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CHHTCTGTGCHCTCCT---
---NNTTTGCACACGGCCC
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CHHTCTGTGCHCTCCT
-WCATTTTGKCCTCYT
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T
A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CHHTCTGTGCHCTCCT---
---ACTATGCCAACCTACC
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CHHTCTGTGCHCTCCT
------ATGCCCACC-
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CHHTCTGTGCHCTCCT
---YCTTTGTTCC---
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CHHTCTGTGCHCTCCT
-TNCCTTTGATCTTN-
 A T G C G C A T G A C T A G C T G T A C A C G T A C T G C G A T C T A G A G T C G A T C A T G C C G A T A G T C A G T C A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T