Information for 10-AATTTAAGTTGTCCTG (Motif 23)

C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
Reverse Opposite:
G T A C C G T A A C T G A C T G C G T A G T A C C G T A C T G A A G T C A C G T A C G T C G T A C G T A C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.427e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.5 +/- 26.8bp
Average Position of motif in Background65.5 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATTTAAGTTGTCCTG
AAATTCAAGTGGNTTN-
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AATTTAAGTTGTCCTG
---TTAAGTGGT----
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AATTTAAGTTGTCCTG
---TTAAGTGGN----
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATTTAAGTTGTCCTG
NTNNTTAAGTGGNTNAN
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

HOXA5/MA0158.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AATTTAAGTTGTCCTG
AATTAGTG--------
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AATTTAAGTTGTCCTG
NTNNTTAAGTGGTTANN
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AATTTAAGTTGTCCTG
----TAAGGCGTCTTG
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AATTTAAGTTGTCCTG
AATNTTAAGTGGNTNN-
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AATTTAAGTTGTCCTG
--NTCAAGTGGN----
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AATTTAAGTTGTCCTG
NATTCAAAT-------
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G C T A C G T A C T G A C G T A G T C A G T C C G A T A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T