Information for 10-AGAAGMWKCYACY (Motif 21)

C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
Reverse Opposite:
T C A G A C T G A C G T C T G A A C T G G T C A C G A T A C T G A G T C A C G T A C G T A G T C A C G T
p-value:1e-6
log p-value:-1.571e+01
Information Content per bp:1.816
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif82.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.9 +/- 26.6bp
Average Position of motif in Background51.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGAAGMWKCYACY--
AGATGCTRCTRCCHT
 C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGAAGMWKCYACY
NGAAGC-------
 C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGMWKCYACY---
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGAAGMWKCYACY
TTCTAGAABNTTCTA--
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGAAGMWKCYACY
TTCTAGAACGTTC----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGAAGMWKCYACY
TTCTAGAACGTTC----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGAAGMWKCYACY
TTCTAGAACGTTC----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGAAGMWKCYACY
AGCAGCTGCT---
 C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGAAGMWKCYACY
--AAGCTTG----
 C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGAAGMWKCYACY------
---ACATGCTACCTAATAC
 C G T A A C T G C G T A C G T A A C T G G T A C C G T A A C G T G T A C A G C T G T C A G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C