Information for 2-AADGAAATTTTGT (Motif 2)

C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
Reverse Opposite:
G T C A G T A C G T C A G C T A C G T A C G T A C G A T A G C T G C A T A G T C G A C T A G C T A G C T
p-value:1e-13
log p-value:-3.021e+01
Information Content per bp:1.709
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif141.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets42.6 +/- 26.2bp
Average Position of motif in Background52.9 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AADGAAATTTTGT
NTAATBNAATTA---
 A C G T A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AADGAAATTTTGT
AAGGATATNTN--
 C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AADGAAATTTTGT
TTGAATGAAATTCGA-
 A C G T A C G T A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AADGAAATTTTGT
NACAGGAAAT-----
 A C G T A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AADGAAATTTTGT
AACAATGNTATTGTT-
 A C G T A C G T A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AADGAAATTTTGT
YTAATYNRATTA---
 A C G T A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AADGAAATTTTGT
TAATTTAATTA---
 A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AADGAAATTTTGT
TAATTTAATTA---
 A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AADGAAATTTTGT
TAATTTAATTA---
 A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AADGAAATTTTGT
AACACTGAAATTGTT-
 A C G T A C G T A C G T C T G A C T G A C T G A A C T G C G T A C T G A C G T A A C G T C G A T C G A T A C G T A C T G A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T