Information for 9-CTACATATTATAG (Motif 19)

A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G
Reverse Opposite:
A G T C G A C T G T C A G C A T C T G A C G T A C G A T G C T A C G A T T A C G G C A T C G T A T C A G
p-value:1e-6
log p-value:-1.592e+01
Information Content per bp:1.676
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.98%
Number of Background Sequences with motif563.6
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets41.8 +/- 20.4bp
Average Position of motif in Background50.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTACATATTATAG-----
--NANTATTATAATTNNN
 A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTACATATTATAG-
AATATACATGTAAAACA
 A C G T A C G T A C G T A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTACATATTATAG-----
--NCGTATTATAATCNTA
 A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTACATATTATAG-
AATATACATGTAATATA
 A C G T A C G T A C G T A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTACATATTATAG-----
--NNTAATTATAATTNNN
 A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTACATATTATAG-
AAAATACATGTAATACT
 A C G T A C G T A C G T A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTACATATTATAG-
AATATACATGTAAAATT
 A C G T A C G T A C G T A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTACATATTATAG----
--CCGTATTATAAACAA
 A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTACATATTATAG-----
--NNTAATTATAATNANN
 A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTACATATTATAG
NNTNNCAATATTAG--
 A C G T A C G T A C G T A G T C G A C T C G T A A G T C G C T A C G A T G C T A A C G T G A C T C G T A A C G T C G T A T A C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T