Information for 3-ATGGAACTAT (Motif 18)

C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T
Reverse Opposite:
C G T A A C G T C G T A T A C G C G A T A G C T A G T C A G T C G T C A A C G T
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.840
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif129.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets47.9 +/- 17.8bp
Average Position of motif in Background51.2 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGGAACTAT
NNTGGAAANN-
 A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGGAACTAT-----
TTTAGAACAATAAAAT
 A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATGGAACTAT
AATGGAAAAT-
 A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGGAACTAT------
AATGAACAATGGAATT
 C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGGAACTAT-----
NNNNNGAACAATTGANN
 A C G T A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGAACTAT
TATGTAAATAT
 A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGAACTAT-----
TTAAGAACAATAAATT
 A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGGAACTAT
AATGGAAAAT-
 A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGGAACTAT--
---GAACAATGG
 C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATGGAACTAT-----
TCACGGAACAATAGGTG
 A C G T A C G T C G T A C A G T C T A G C T A G C T G A C G T A A T G C C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G