Information for 8-CTGGAGGCTGCCT (Motif 17)

A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
Reverse Opposite:
C T G A C T A G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C G A T C G T C A A T C G
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.735
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif105.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets51.5 +/- 25.7bp
Average Position of motif in Background52.0 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTGGAGGCTGCCT
-----NGCTN---
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGGAGGCTGCCT--
-----TGCTGACTCA
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGGAGGCTGCCT-----
--ACATGCTACCTAATAC
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL002.1_INR/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGGAGGCTGCCT
---NNNANTGA--
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTGGAGGCTGCCT
------GCTGTG-
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGGAGGCTGCCT
---TWGTCTGV--
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGGAGGCTGCCT
CTGGCAGNCTGCCA
 A C G T A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGGAGGCTGCCT
------GCTTCC-
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTGGAGGCTGCCT---
-------CTGCCCGCA
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGGAGGCTGCCT
--AGCAGCTGCT-
 A T G C C A G T C A T G T C A G G T C A C A T G A T C G G T A C C G A T A C T G G T A C A G T C A G C T
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T