Information for 5-TYTSTGTAACCASRGA (Motif 13)

A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
Reverse Opposite:
A C G T A G T C A G C T A T G C A C G T A C T G A C T G A C G T A C G T C G T A A G T C G T C A A T G C C G T A C T G A C G T A
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.885
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 27.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TYTSTGTAACCASRGA-
--NNNGTAACTANGNNA
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A A C G T
A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TYTSTGTAACCASRGA
------AAACCACAGC
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TYTSTGTAACCASRGA-----
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TYTSTGTAACCASRGA
-----NAAACCACAG-
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TYTSTGTAACCASRGA-
------AAACCACAGAN
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TYTSTGTAACCASRGA
--TATGTAAACANG--
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TYTSTGTAACCASRGA
-CAAAGTAAACANNNN
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TYTSTGTAACCASRGA
----DGTAAACA----
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TYTSTGTAACCASRGA
------AAACCACANN
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TYTSTGTAACCASRGA
-----GTAAACAG---
 A C G T A G C T A C G T A T C G A C G T A C T G C G A T C G T A C G T A A G T C A G T C C G T A A T C G C T G A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T