Information for 2-AAGTAAAGGC (Motif 11)

G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C
Reverse Opposite:
T A C G A G T C T A G C A C G T A G C T A C G T T C G A A G T C A G C T C A G T
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.825
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif278.3
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets56.1 +/- 29.9bp
Average Position of motif in Background48.4 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGTAAAGGC
AAAGTAAACA-
 A C G T G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGTAAAGGC
AAAAGTCAA---
 A C G T A C G T G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGTAAAGGC
AAAGTAAACA-
 A C G T G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGTAAAGGC
WAAGTAAAYA-
 A C G T G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAGTAAAGGC
NCTAAGTAAACA-
 A C G T A C G T A C G T G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTAAAGGC---
CAAAGTAAACANNNN
 A C G T A C G T G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGTAAAGGC
AAATAAACA-
 G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGTAAAGGC-
AAGTAAACAAA
 G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C A C G T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGTAAAGGC--
ANGNAAAGGTCA
 G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGTAAAGGC----
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T G C T A C T G A A C T G A G C T C G T A C T G A C G T A A T C G T C A G A T G C A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C