Information for 4-HTCCGGCGCB (Motif 4)

G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G
Reverse Opposite:
T A G C C T A G A T G C A C T G G T A C A G T C C T A G C T A G G T C A C T G A
p-value:1e-34
log p-value:-7.933e+01
Information Content per bp:1.683
Number of Target Sequences with motif211.0
Percentage of Target Sequences with motif22.62%
Number of Background Sequences with motif3836.0
Percentage of Background Sequences with motif9.07%
Average Position of motif in Targets54.0 +/- 24.6bp
Average Position of motif in Background50.6 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:HTCCGGCGCB--
----GGCGCGCT
 G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:HTCCGGCGCB---
-TTTGGCGCCAAA
 G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T A C G T
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-HTCCGGCGCB------
AGCTCGGCGCCAAAAGC
 A C G T G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-HTCCGGCGCB------
CCTTCGGCGCCAAAAGG
 A C G T G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:HTCCGGCGCB------
-TCCGTCGCTTAAAAG
 G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-HTCCGGCGCB----
ATAAAGGCGCGCGAT
 A C G T G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-HTCCGGCGCB----
ATAAGGGCGCGCGAT
 A C G T G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:HTCCGGCGCB
---CGGAGC-
 G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-HTCCGGCGCB
GCGCCTGCGCA
 A C G T G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--HTCCGGCGCB-----
NAGANTGGCGGGGNGNA
 A C G T A C G T G A C T C A G T A G T C G A T C A C T G A C T G A G T C A T C G A G T C A T C G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A