Information for 19-AMTMRAGCTGCYT (Motif 25)

C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G A G T C C G T A A C T G A G T C A G C T A G C T A C T G C G T A A C T G C G A T
p-value:1e-9
log p-value:-2.176e+01
Information Content per bp:1.861
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.4 +/- 30.0bp
Average Position of motif in Background52.3 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------AMTMRAGCTGCYT-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AMTMRAGCTGCYT
-NNGCAGCTGTC-
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AMTMRAGCTGCYT
---NCAGCTGCTG
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AMTMRAGCTGCYT
-NNGCAGCTGTT-
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AMTMRAGCTGCYT
----CAGCTGNT-
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AMTMRAGCTGCYT-
--AGCAGCTGCTNN
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AMTMRAGCTGCYT
---GCAGCTGTNN
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AMTMRAGCTGCYT
---HCAGCTGDTN
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AMTMRAGCTGCYT
--AGCAGCTGCT-
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AMTMRAGCTGCYT--
--TGCAGCTGTCCCT
 C G T A T G A C A C G T G T A C C T G A C T G A A C T G G T A C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T