Information for 11-GAGWGGWSGCYKGGGT (Motif 22)

A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
Reverse Opposite:
C T G A A T G C A G T C A G T C G T A C C T G A A C T G A G T C A T C G C G T A A G T C A G T C C G A T A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.857
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.4 +/- 14.0bp
Average Position of motif in Background41.3 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGWGGWSGCYKGGGT
CAGTGTGGTCGC------
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGWGGWSGCYKGGGT
TTGAGTGSTT--------
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGWGGWSGCYKGGGT
CTTGAGTGGCT--------
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GAGWGGWSGCYKGGGT
BTBRAGTGSN---------
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GAGWGGWSGCYKGGGT
TCGGTGGTCGCN-----
 A C G T A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GAGWGGWSGCYKGGGT
CTYRAGTGSY---------
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GAGWGGWSGCYKGGGT
--GTGGGGGAGGGG--
 A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAGWGGWSGCYKGGGT
-GGCGGGGGCGGGGG-
 A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAGWGGWSGCYKGGGT--
-NAAGGGGGCGTGGCTTN
 A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T A C G T A C G T
A C G T C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GAGWGGWSGCYKGGGT
TTRAGTGSYK--------
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G G C A T A T C G C T A G A G T C A G C T A C T G A C T G A C T G A T C G A G C T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T