Information for 12-GAGAAGCAAAGCG (Motif 14)

A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C A C G T A C G T A C G T A T C G A G T C C G A T A C G T A T G C C G A T A G T C
p-value:1e-12
log p-value:-2.971e+01
Information Content per bp:1.791
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif21.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.3 +/- 35.4bp
Average Position of motif in Background54.8 +/- 50.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGAAGCAAAGCG----
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGAAGCAAAGCG
--AAAACAAAGG-
 A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGAAGCAAAGCG
-ATATGCAAAT--
 A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GAGAAGCAAAGCG
--GGAACAAAGR-
 A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGAAGCAAAGCG
NATGTTGCAA----
 A C G T A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAGAAGCAAAGCG
--VRRACAAWGG-
 A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAGAAGCAAAGCG
-TTATGCAAAT--
 A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAGAAGCAAAGCG
-NGAAGC------
 A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GAGAAGCAAAGCG
--------CAGCC
 A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GAGAAGCAAAGCG---
AGAAGAACAAAGGACTA
 A C G T A C T G C G T A A T C G T G C A G C T A C T A G A T G C G T C A G T C A G T C A C T A G A G T C A T C G A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A