Information for 9-CSGRAAAMKCGCT (Motif 13)

A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C T G G T A C A C G T A G C T A C G T A C G T A G T C A G T C A T G C A C T G
p-value:1e-14
log p-value:-3.241e+01
Information Content per bp:1.872
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 25.7bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CSGRAAAMKCGCT
--GGAAATTCCC-
 A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CSGRAAAMKCGCT
--GGAAATCCCC-
 A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CSGRAAAMKCGCT
--GGAAATTCCC-
 A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CSGRAAAMKCGCT
RCCGGAARYN----
 A C G T A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CSGRAAAMKCGCT
-GGGAAATCCCCN
 A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CSGRAAAMKCGCT
GGCGGGAAAH-----
 A C G T A C G T A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CSGRAAAMKCGCT
--GGAAANCCCC-
 A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CSGRAAAMKCGCT
TGGCGGGAAAHB----
 A C G T A C G T A C G T A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CSGRAAAMKCGCT
DCCGGAARYN----
 A C G T A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CSGRAAAMKCGCT
ACCGGAAG------
 A C G T A G T C A T C G A C T G C T A G C G T A C G T A C T G A T G C A A C T G A G T C A C T G A G T C A C G T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T