Information for 3-CGGRCGMGGCGGCCGK (Motif 6)

A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
Reverse Opposite:
G T A C A T G C A C T G T C A G A T G C A G T C A C T G A T G C A T G C A C T G A T G C T A C G A G T C A G T C A G T C A T C G
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.766
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.2 +/- 26.3bp
Average Position of motif in Background49.4 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGRCGMGGCGGCCGK
GGCGGGGGCGGGGG----
 A C G T A C G T A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGRCGMGGCGGCCGK
DGGGYGKGGC------
 A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGRCGMGGCGGCCGK
TGGGTGGGGC------
 A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGRCGMGGCGGCCGK
NCGCGGACGTTG-------
 A C G T A C G T A C G T A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGGRCGMGGCGGCCGK
GGGGNGGGGC------
 A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGGRCGMGGCGGCCGK
MKGGGYGTGGCC-----
 A C G T A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGGRCGMGGCGGCCGK
-GGGGGGGG-------
 A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGRCGMGGCGGCCGK
GGGGGCGGGGCC-----
 A C G T A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGGRCGMGGCGGCCGK
-GGGGGCGGGGC----
 A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGGRCGMGGCGGCCGK
NNVDGGGYGGGGCYN----
 A C G T A C G T A C G T A T G C A C T G A C T G C T A G A T G C A T C G G T A C A T C G A T C G G T A C C T A G A T C G A G T C A G T C A T C G A C T G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T