Information for 6-TTAGGCATTG (Motif 10)

C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
Reverse Opposite:
A G T C G T C A C G T A A C G T A T C G A G T C A G T C C G A T C G T A C G T A
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.841
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets60.2 +/- 25.9bp
Average Position of motif in Background44.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGCATTG---
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGCATTG
GHATATKCAT--
 A C G T A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGCATTG
GAATATTCAT--
 A C G T A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTAGGCATTG
TTATGCAAT-
 C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGCATTG
NATTGTGCAAT-
 A C G T A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAGGCATTG
ATTGCGCAAT-
 A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGCATTG
TGAATTATGCAT--
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTAGGCATTG
ATTGCGCAAT-
 A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTAGGCATTG
ATTGCGCAAT-
 A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTAGGCATTG
NNTTGGCANN-
 A C G T C G A T A C G T C G T A A C T G A C T G T A G C C G T A C G A T A C G T C T A G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T