Information for 2-CWGGRRCTYTCAA (Motif 6)

A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A C T G A C G T A A C T G A G C T A G T C G T A C A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.821e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 28.6bp
Average Position of motif in Background21.3 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CWGGRRCTYTCAA---
AAGCACCTGTCAATAT
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CWGGRRCTYTCAA
-----GCTGTCAA
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CWGGRRCTYTCAA---
AAAGACCTGTCAATAC
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CWGGRRCTYTCAA---
AACGAGCTGTCAATAC
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CWGGRRCTYTCAA---
AACTAGCTGTCAATAC
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CWGGRRCTYTCAA-
---AGCCACTCAAG
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CWGGRRCTYTCAA---
AATTACCTGTCAATAC
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CWGGRRCTYTCAA---
AAAGACCTGTCAATCC
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CWGGRRCTYTCAA----
NNNCAGCTGTCAATATN
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CWGGRRCTYTCAA
-----CCTGTCAA
 A G T C C G A T A C T G A C T G C T A G C T G A A G T C A C G T A G C T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A