Information for 12-AGAGAAGGCAAGCTGG (Motif 15)

C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A C T G A T G C A C G T A C G T C T A G A G T C A G T C A C G T G C A T G T A C A C G T A G T C A G C T
p-value:1e-7
log p-value:-1.753e+01
Information Content per bp:1.922
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 22.4bp
Average Position of motif in Background56.4 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGAGAAGGCAAGCTGG
----AAGGCAAGTGT-
 C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAGAAGGCAAGCTGG
--AAAAGTCAA-----
 C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAGGCAAGCTGG
AAGATAAGATAACA---
 A C G T C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAGGCAAGCTGG
CAGATAAGGN-------
 A C G T C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAAGGCAAGCTGG
NNGAGATAAGA--------
 A C G T A C G T A C G T C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAAGGCAAGCTGG
NAGATAAGNN-------
 A C G T C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAGGCAAGCTGG
NVAGATAAGR--------
 A C G T A C G T C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:AGAGAAGGCAAGCTGG
--------CAAGCTT-
 C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:AGAGAAGGCAAGCTGG----
--------CAAGATGGCGGC
 C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGAGAAGGCAAGCTGG-
-----VNAVCAGCTGGC
 C T G A A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A T C G A G T C A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C