Information for 3-GAGGACGGAA (Motif 13)

C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A
Reverse Opposite:
C G A T A C G T T A G C G T A C T C A G A G C T A G T C G T A C A C G T G A T C
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.675
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif642.3
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets52.2 +/- 25.7bp
Average Position of motif in Background47.7 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf3/MA0605.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGGACGGAA
GATGACGT--
 C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A
A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAGGACGGAA--
GGATGATGCAATA
 A C G T C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAGGACGGAA
GGGAGGACNG--
 A C G T A C G T C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGACGGAA---
ARGAGGMCAAAATGW
 A C G T A C G T C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGGACGGAA
NCGCGGACGTTG
 A C G T A C G T C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGACGGAA
GATGACGTCA
 C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGACGGAA
TATGACGTAA
 C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGACGGAA--
GATGACGTCATC
 C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A A C G T A C G T
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

BATF3/MA0835.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGACGGAA---
TGATGACGTCATCA
 A C G T C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A A C G T A C G T A C G T
G A C T C T A G T C G A C G A T A C T G C G T A G T A C C T A G A C G T G T A C C G T A A G C T G T A C C T G A

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGGACGGAA---
---RCCGGAAGTD
 C T A G T G C A C A T G T C A G T C G A A G T C C A T G A T C G T G C A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G