Information for 5-CCTGTGGCTGGCCCAG (Motif 6)

A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
Reverse Opposite:
A T G C A G C T C A T G A C T G A T C G T A G C A G T C C T G A A C T G A G T C A G T C G T C A T A G C C T G A A C T G A T C G
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.789
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.2 +/- 23.8bp
Average Position of motif in Background59.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGCTGGCCCAG
TGCCTGAGGCN-------
 A C G T A C G T A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGCTGGCCCAG
NGCCTNAGGCN-------
 A C G T A C G T A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGGCTGGCCCAG
NGCCTGAGGCN-------
 A C G T A C G T A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTGTGGCTGGCCCAG
--CGTGGGTGGTCC--
 A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGCTGGCCCAG
GTCTGTGGTTT------
 A C G T A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCTGTGGCTGGCCCAG
ATTGCCTGAGGCAAT-----
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCTGTGGCTGGCCCAG
ATGCCCTGAGGC--------
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTGTGGCTGGCCCAG--
---GGGGCTYGKCTGGGA
 A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G A C G T A C G T
A C G T A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTGGCTGGCCCAG
WTGSCCTSAGGS--------
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTGTGGCTGGCCCAG
--GGGGGCGGGGCC--
 A T G C A G T C A G C T A T C G A C G T A C T G A C T G A G T C A G C T C T A G A C T G A T G C A G T C G A T C C T G A A T C G
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T