Information for 5-TGGTGCCATCTGC (Motif 3)

A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C
Reverse Opposite:
A T C G G T A C C G T A A C T G C G T A A C G T A C T G A C T G A T G C C G T A A T G C A G T C C G T A
p-value:1e-14
log p-value:-3.319e+01
Information Content per bp:1.774
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif63.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets57.2 +/- 22.7bp
Average Position of motif in Background56.4 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.77
Offset:4
Orientation:forward strand
Alignment:TGGTGCCATCTGC-
----GCCATCTGTT
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGGTGCCATCTGC----
CCNNACCATCTGGCCTN
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TGGTGCCATCTGC-
----ACCATCTGTT
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGTGCCATCTGC
-GCCGCCATCTTG
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGTGCCATCTGC
-GCNGCCATCTTG
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGGTGCCATCTGC
--ATGCCAACC--
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TGGTGCCATCTGC---
----GCCAGCTGBTNB
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGGTGCCATCTGC------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGGTGCCATCTGC-
----RCCATMTGTT
 A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGGTGCCATCTGC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C T G T A C G G C A T A T C G A G T C A G T C G T C A G C A T A G T C C G A T C A T G A T G C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C