Information for 18-AGACCCTGCACGT (Motif 26)

C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T
Reverse Opposite:
T C G A A G T C T C A G G A C T A T C G A T G C G T C A C T A G C A T G A C T G A C G T A T G C A C G T
p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.653
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif398.8
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets53.7 +/- 23.5bp
Average Position of motif in Background46.1 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:AGACCCTGCACGT--
-------GCACGTAY
 C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:AGACCCTGCACGT--
-------GCACGTNC
 C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGACCCTGCACGT--
AATCGCACTGCATTCCG
 A C G T A C G T C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

GLIS1/MA0735.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGACCCTGCACGT---
AGACCCCCCACGAAGC
 C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T A C G T A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AGACCCTGCACGT-
------BGCACGTA
 C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.61
Offset:7
Orientation:forward strand
Alignment:AGACCCTGCACGT----
-------GCACGTACCC
 C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGACCCTGCACGT
SNGCACCTGCHS--
 A C G T C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGACCCTGCACGT
AAGACCCYYN----
 A C G T C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGACCCTGCACGT-
NNGCNCTGCGCGGC
 C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AGACCCTGCACGT--
-------GCACGTGA
 C G T A T A C G T G C A T G A C G T A C G A T C A C G T T A C G T A G C C T G A A G T C T C A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A