p-value: | 1e-7 |
log p-value: | -1.816e+01 |
Information Content per bp: | 1.668 |
Number of Target Sequences with motif | 63.0 |
Percentage of Target Sequences with motif | 9.16% |
Number of Background Sequences with motif | 2008.6 |
Percentage of Background Sequences with motif | 4.22% |
Average Position of motif in Targets | 49.4 +/- 24.8bp |
Average Position of motif in Background | 50.7 +/- 34.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGTATGCAGC- CCATTGTATGCAAAT |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGTATGCAGC- NNGCGTGTGTGCNGCN |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TGTATGCAGC- ------CAGCC |
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PB0208.1_Zscan4_2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGTATGCAGC- NNNNTTGTGTGCTTNN |
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PB0155.1_Osr2_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTATGCAGC---- NNTGTAGGTAGCANNT |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGTATGCAGC------ NNNANTGCAGTGCNNTT |
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Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGTATGCAGC----- -----NCAGCTGCTG |
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SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGTATGCAGC-- ----ANCAGCTG |
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MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGTATGCAGC------ ----AGCAGCTGCTNN |
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Ascl2/MA0816.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TGTATGCAGC---- ----AGCAGCTGCT |
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