Information for 9-TGAAGGCTCCSGGAKG (Motif 12)

C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
Reverse Opposite:
A G T C G T A C A G C T G T A C A G T C A T G C A C T G A T C G C G T A A T C G G T A C A G T C C G A T A C G T A G T C C G T A
p-value:1e-11
log p-value:-2.600e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 23.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGAAGGCTCCSGGAKG
-----GCTCCG-----
 C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:2
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TGAAGGCTCCSGGAKG--
-------ACCCGGATGTA
 C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TGAAGGCTCCSGGAKG-
-------ANCAGGATGT
 C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGAAGGCTCCSGGAKG
ATGACGTCATCN-----
 A C G T C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGGCTCCSGGAKG
GTGACGTCACCG-----
 A C G T C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T A C G T A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGAAGGCTCCSGGAKG
ATGACGTCATCN-----
 A C G T C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TGAAGGCTCCSGGAKG--
----CACCCCCGGGGGGG
 C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TGAAGGCTCCSGGAKG
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

PB0004.1_Atf1_1/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----TGAAGGCTCCSGGAKG
ACGATGACGTCATCGA----
 A C G T A C G T A C G T A C G T C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A A C G T A C G T A C G T A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TGAAGGCTCCSGGAKG
GATGACGTCATC------
 A C G T A C G T C G A T A C T G T C G A C G T A A C T G A C T G A T G C C G A T A T G C A G T C T A C G C T A G A C T G C T G A A C T G A C T G
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T