Information for 5-AKCCCAGGRACAGAVT (Motif 6)

T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
Reverse Opposite:
T G C A A T G C A G C T A G T C C G A T A T C G G A C T A G T C A G T C G T A C A C G T A C T G C T A G T A C G T G A C A C G T
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.671
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 13.3bp
Average Position of motif in Background37.2 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:AKCCCAGGRACAGAVT
---CCAGGAACAG---
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AKCCCAGGRACAGAVT
TGCCCAGNHW------
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AKCCCAGGRACAGAVT-------
---YCAGGCWCAGTACCAGGCTC
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AKCCCAGGRACAGAVT
-----TGGAACAGMA-
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AKCCCAGGRACAGAVT
-SCCTAGCAACAG---
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AKCCCAGGRACAGAVT
--------CACAGN--
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AKCCCAGGRACAGAVT
---CAAAGGTCAG---
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AKCCCAGGRACAGAVT
AAGTTCAAGGTCAGC--
 A C G T T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AKCCCAGGRACAGAVT
GTCCCCAGGGGA-----
 A C G T T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AKCCCAGGRACAGAVT
--BTCAAGGTCA----
 T G C A A C T G A T G C G A T C G T A C C G T A C A T G C T A G T C A G C G T A A T G C C G T A A C T G T C G A T A C G A C G T
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T