Information for 5-TGYCAMGTTTCAGGGT (Motif 6)

A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T
Reverse Opposite:
G T C A A G T C G T A C A G T C C G A T A C T G T C G A C T G A T C G A T G A C A C G T A C G T A T C G C T G A G A T C T G C A
p-value:1e-12
log p-value:-2.780e+01
Information Content per bp:1.704
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets28.7 +/- 17.2bp
Average Position of motif in Background55.9 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGYCAMGTTTCAGGGT
GKVTCADRTTWC-----
 A C G T A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGYCAMGTTTCAGGGT-
-AACAATGTGCAGTGTT
 A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T A C G T
A C G T C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

PAX9/MA0781.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGYCAMGTTTCAGGGT-
CGTCACGCATGACTGCA
 A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGYCAMGTTTCAGGGT
GTGCCACGCGACTG---
 A C G T A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGYCAMGTTTCAGGGT-
-----GTCCCCAGGGGA
 A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGYCAMGTTTCAGGGT
GKMTCADRTTWC-----
 A C G T A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGYCAMGTTTCAGGGT-
CGTCACGCATGACTGCA
 A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TGYCAMGTTTCAGGGT---
-------TGTCAGGGGGCG
 A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGYCAMGTTTCAGGGT
----TGGTTTCAGT--
 A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T
A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TGYCAMGTTTCAGGGT--
------GCCTCAGGGCAT
 A C G T C T A G A G C T A T G C G T C A G T C A A C T G A G C T A G C T A G C T A G T C C G T A A C T G A C T G C T A G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T