Information for 4-AGCCGACBGGCCCCCG (Motif 5)

C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
Reverse Opposite:
A G T C A T C G A C T G A C T G T A C G A C T G A T G C G T A C T A G C A C T G C G A T A G T C C T A G A C T G A G T C A C G T
p-value:1e-13
log p-value:-3.170e+01
Information Content per bp:1.826
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 29.2bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGACBGGCCCCCG
NTGCCCTTGGGCGN---
 A C G T C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCCGACBGGCCCCCG
CAGCC------------
 A C G T C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGCCGACBGGCCCCCG-----
----AAATTCCCCCCGGAAGT
 C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----AGCCGACBGGCCCCCG
NNTTTANNCGACGNA------
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:5
Score:0.46
Offset:-5
Orientation:forward strand
Alignment:-----AGCCGACBGGCCCCCG
TTTCGAGCGGAACGGTCGC--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--AGCCGACBGGCCCCCG
BCAGACWA----------
 A C G T A C G T C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.45
Offset:0
Orientation:forward strand
Alignment:AGCCGACBGGCCCCCG
TGCCCCAGGGCA----
 C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.45
Offset:0
Orientation:forward strand
Alignment:AGCCGACBGGCCCCCG
TGCCCCCGGGCA----
 C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.45
Offset:0
Orientation:forward strand
Alignment:AGCCGACBGGCCCCCG
TGCCCCAGGGCA----
 C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGACBGGCCCCCG
NCGCGGACGTTG-----
 A C G T C G T A A C T G A G T C A G T C A C T G C G T A G T A C A C T G A C T G A T C G A G T C A T G C G T A C G T A C A T G C A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T