Information for 10-TCGCCATCGA (Motif 38)

C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A
Reverse Opposite:
G A C T A T G C C T A G G T C A G A C T A C T G A C T G A G T C A T C G C G T A
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.724
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.0 +/- 11.6bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGCCATCGA
GTCCGCCATTA-
 A C G T A C G T C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGCCATCGA
TCCCCA----
 C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGCCATCGA
-TGCCAA---
 C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCGCCATCGA
CGTGCCAAG--
 A C G T C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCGCCATCGA-
ACGCCCACGCA
 C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCGCCATCGA-
YCCGCCCACGCN
 A C G T C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCGCCATCGA--
--GCCATCTGTT
 C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TCGCCATCGA-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCGCCATCGA
AGCGCGCC-----
 A C G T A C G T A C G T C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCGCCATCGA
ACTAGCCAATCA
 A C G T A C G T C G A T A T G C C T A G A G T C A G T C C T G A C A G T A G T C T A C G C T G A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A