Information for 18-GGTGACAAGACAGAGT (Motif 28)

A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
Reverse Opposite:
G T C A A G T C A C G T A G T C A G C T A C T G A C G T A T G C A C G T A G C T A C T G A C G T A T G C C G T A A G T C A G T C
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 25.3bp
Average Position of motif in Background60.8 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTGACAAGACAGAGT
GGTGCCAAGT------
 A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGTGACAAGACAGAGT
--TGTCTAGACG----
 A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGTGACAAGACAGAGT
-----CCAGACAG---
 A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTGACAAGACAGAGT
RHTGWCAR--------
 A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGTGACAAGACAGAGT
AGGTGTCA---------
 A C G T A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGTGACAAGACAGAGT
-TTGACAGG-------
 A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGTGACAAGACAGAGT
GGTGYTGACAGS-------
 A C G T A C G T A C G T A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGTGACAAGACAGAGT
-GTCACATGAY-----
 A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGTGACAAGACAGAGT
ARNTGACA---------
 A C G T A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGTGACAAGACAGAGT
AGGTGTTAAT-------
 A C G T A C T G A C T G C G A T A T C G G T C A A G T C C T G A C G T A A T C G C G T A G T A C C T G A A C T G C G T A C T A G A C G T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T