Information for 12-GSGGMWCCCTGCR (Motif 27)

A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C C G T A A C T G A C T G C T A G C G T A A C G T A G T C A G T C A T C G G T A C
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.8 +/- 25.4bp
Average Position of motif in Background29.0 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GSGGMWCCCTGCR----
--GGCCYCCTGCTGDGH
 A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GSGGMWCCCTGCR
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GSGGMWCCCTGCR
GGGGATTCCCCC-
 A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GSGGMWCCCTGCR---
----CCCCCTGCTGTG
 A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GSGGMWCCCTGCR-----
-AATCGCACTGCATTCCG
 A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GSGGMWCCCTGCR
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GSGGMWCCCTGCR--
-TGGCAGNCTGCCAG
 A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GSGGMWCCCTGCR
GGGCGGGACC-----
 A C G T A C G T A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GSGGMWCCCTGCR----
--GACCCCCCGCTGTGC
 A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GSGGMWCCCTGCR
-------GCTGTG
 A C T G A T G C A C T G A C T G G T C A C G A T A G T C A G T C A G T C A C G T A C T G A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G