Information for 13-WGCCYCTSTGTBCYCA (Motif 20)

C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A
Reverse Opposite:
C A G T C T A G C T A G T A C G T C A G C T G A G T A C G T C A A T G C G C T A A C T G C T A G C A T G T A C G A T G C G C T A
p-value:1e-10
log p-value:-2.323e+01
Information Content per bp:1.588
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif617.0
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets37.8 +/- 22.8bp
Average Position of motif in Background50.5 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.57
Offset:8
Orientation:forward strand
Alignment:WGCCYCTSTGTBCYCA--
--------HTTTCCCASG
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:WGCCYCTSTGTBCYCA-----
-----GGGTGTGCCCAAAAGG
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:WGCCYCTSTGTBCYCA
----------TCCCCA
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:WGCCYCTSTGTBCYCA-----
----NSTGTTTRCWCAGBNNN
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.51
Offset:9
Orientation:forward strand
Alignment:WGCCYCTSTGTBCYCA--
---------ATGCCCACC
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

SRF/MA0083.3/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:WGCCYCTSTGTBCYCA
TGNCCATATATGGTCA
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:WGCCYCTSTGTBCYCA----
---NTNTATGTGCACATNNN
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:WGCCYCTSTGTBCYCA
TGWCCTCARNTGACC-
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:WGCCYCTSTGTBCYCA-
-------CTGTTCCTGG
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:WGCCYCTSTGTBCYCA
----YCTTTGTTCC--
 C G A T A T C G A T G C G T A C A G T C T G A C C G A T T A C G A C G T C A T G A G C T A G C T A T G C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T