Information for 10-CTGGCCACTTTCACTM (Motif 14)

A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A
Reverse Opposite:
A C G T C G T A A T C G A C G T A C T G C T G A T C G A C T G A A C T G C A G T A C T G A C T G A G T C G T A C C T G A T A C G
p-value:1e-11
log p-value:-2.572e+01
Information Content per bp:1.742
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.6 +/- 19.3bp
Average Position of motif in Background39.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CTGGCCACTTTCACTM--
------ACTTTCACTTTC
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTGGCCACTTTCACTM---
----TCACTTTCACTTTCN
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGGCCACTTTCACTM
---GCCACRCCCACY-
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A
A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCCACTTTCACTM
GYCTGGYYTNTGTCA---
 A C G T A C G T A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGCCACTTTCACTM-
TAAGCCACGCCCCCTTT
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGGCCACTTTCACTM--
------NCTGTCAATCAN
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGGCCACTTTCACTM
---GCCACGCCCACT-
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A
A C G T A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGGCCACTTTCACTM-
-AAGCACCTGTCAATAT
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PKNOX2/MA0783.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGCCACTTTCACTM
-TGACACCTGTCA---
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGGCCACTTTCACTM--
------SCTGTCAVTCAV
 A T G C A G C T C A T G A C T G A G T C G T A C G C T A G T A C A G C T A C G T A G C T A G T C G T C A A T G C A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A