Information for 8-GGCGGTAAGAACAGGT (Motif 8)

A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
Reverse Opposite:
C T G A G T A C A T G C C G A T A C T G C G A T A C G T A G T C A C G T A C G T C G T A A G T C A G T C A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.916
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 10.4bp
Average Position of motif in Background43.5 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCGGTAAGAACAGGT
CWGGCGGGAA--------
 A C G T A C G T A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCGGTAAGAACAGGT
GGGCGGGAAGG------
 A C G T A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCGGTAAGAACAGGT
GGGCGGGAAGG------
 A C G T A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGCGGTAAGAACAGGT-----
-----GAAGAACAGGTGTCCG
 A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCGGTAAGAACAGGT
BTKGGCGGGAAA-------
 A C G T A C G T A C G T A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCGGTAAGAACAGGT
-CAGGTAAGTAT----
 A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCGGTAAGAACAGGT
GGCGGGAAAH------
 A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GGCGGTAAGAACAGGT--
---------AACAGGTGT
 A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCGGTAAGAACAGGT
GGCGGGAARN------
 A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGCGGTAAGAACAGGT
----CCAGGAACAG--
 A C T G C T A G G T A C A C T G A C T G A C G T C G T A T G C A A C T G C G T A C G T A A G T C C G T A A T C G A C T G A G C T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T