Information for 3-GCTGTCCGTT (Motif 15)

A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
Reverse Opposite:
C G T A G T C A A G T C C T A G A C T G C G T A A G T C C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.348e+01
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.6 +/- 14.8bp
Average Position of motif in Background62.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTGTCCGTT
GCTGTG----
 A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTGTCCGTT
-CTGTCTGG-
 A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTGTCCGTT
VBSYGTCTGG-
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTCCGTT----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCTGTCCGTT
--TGTCGGTT
 A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTGTCCGTT
GCTGTCAA--
 A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTGTCCGTT--
--TGGCAGTTGG
 A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTGTCCGTT--
--TGGCAGTTGN
 A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGTCCGTT
VGCTGWCAVB-
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGTCCGTT--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C