Information for 6-GAAGGTAGGATCT (Motif 13)

A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A G T C A T G C A C G T C G T A A G T C A G T C A C G T A G C T A G T C
p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.964
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 25.7bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAGGTAGGATCT----
-CTACTAGGATGTNNTN
 A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAAGGTAGGATCT---
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAGGTAGGATCT
-CAGGTAAGTAT-
 A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAAGGTAGGATCT------
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAAGGTAGGATCT
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAAGGTAGGATCT
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAAGGTAGGATCT----
-AAGATCGGAANTNNNA
 A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAGGTAGGATCT---
-ADGGYAGYAGCATCT
 A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAAGGTAGGATCT-
--AGGAAACAGCTG
 A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAAGGTAGGATCT
--AGGTGTGA---
 A C T G C T G A C G T A A C T G A C T G A C G T C G T A A T C G A C T G C G T A A C G T A G T C A C G T
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T