Information for 5-GAAAAGTGTCAGG (Motif 12)

A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C T A G C A C G T A T C G C G T A A G T C C G T A A G T C A C G T C G A T A C G T A C G T A G T C
p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.941
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 26.5bp
Average Position of motif in Background74.8 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAAAGTGTCAGG
TGACAGGTGTCA--
 A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAAAGTGTCAGG
TGACAGGTGTCA--
 A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAAAAGTGTCAGG
---AGGTGTCA--
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAAAAGTGTCAGG-
----VBTGWCAGCB
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

TGIF2/MA0797.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAAAGTGTCAGG
TGACAGCTGTCA--
 A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAAAAGTGTCAGG
---AGGTGTGAAM
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAAAAGTGTCAGG
---AGGTGTGA--
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAAAGTGTCAGG--
-AAAATTGTTATGAA
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAAAAGTGTCAGG
-----NTGTCAN-
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAAAGTGTCAGG
--AAGGTGTGAAA
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A