Information for 4-ACATTGMTTAYTCTAA (Motif 6)

C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
Reverse Opposite:
A C G T A G C T C G T A A C T G C G T A C T A G G A C T G T C A C T G A A C G T T G A C C G T A C T G A C G A T A C T G A C G T
p-value:1e-11
log p-value:-2.618e+01
Information Content per bp:1.776
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.5 +/- 27.1bp
Average Position of motif in Background46.5 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACATTGMTTAYTCTAA
ACTTTCGTTTCT----
 C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACATTGMTTAYTCTAA
ACNNTAATTACNNCAN
 C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACATTGMTTAYTCTAA-
-NNTTTATTGTTCTNNN
 C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A A C G T
A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ACATTGMTTAYTCTAA--
----TAATTGTTCTAAAC
 C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACATTGMTTAYTCTAA
--ATTGATTYND----
 C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACATTGMTTAYTCTAA
GACAATGNN--------
 A C G T C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACATTGMTTAYTCTAA--
--ANTCCTTTGTCTNNNN
 C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACATTGMTTAYTCTAA
TAAAAATGCTGACTT---
 A C G T A C G T C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ACATTGMTTAYTCTAA
ACAAAGGNBCCT----
 C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ACATTGMTTAYTCTAA
TNNNATGATTTCNNCNN
 A C G T C G T A A G T C C G T A G A C T A C G T A C T G G T C A A G C T A C G T C T G A A G T C A C G T A G T C G C A T C T G A C G T A
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T