Information for 7-ATCCATCCAT (Motif 23)

C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G A C T G C T G A A C G T A C T G A C T G C G T A A C G T
p-value:1e-5
log p-value:-1.209e+01
Information Content per bp:1.945
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.0 +/- 19.9bp
Average Position of motif in Background41.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATCCATCCAT---
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATCCATCCAT-----
TCACCCATCAATAAACA
 A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATCCATCCAT
CCATCAATCAAA
 A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCCATCCAT
GYCATCMATCAT-
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATCCATCCAT---
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCCATCCAT
NTATYGATCH--
 A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATCCATCCAT
HNRAATCAAT----
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATCCATCCAT
TAATCGATAA--
 A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATCCATCCAT--
GAAGATCAATCACTTA
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCCATCCAT
ATCCAC----
 C G T A A C G T A G T C A G T C C G T A A G C T A G T C A G T C C G T A A C G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T