Information for 9-TTGGCTAGTCTGC (Motif 21)

C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A A C T G C T G A T G A C C A G T C G T A A C T G G T A C A T G C C G T A G T C A
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.738
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.4 +/- 26.0bp
Average Position of motif in Background65.3 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTGGCTAGTCTGC
---VBSYGTCTGG
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TTGGCTAGTCTGC
-----TWGTCTGV
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTGGCTAGTCTGC
-----CTGTCTGG
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGGCTAGTCTGC--
GGGGCTYGKCTGGGA
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTGGCTAGTCTGC----
--GGNGCGNCTGTTNNN
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTGGCTAGTCTGC-
----TGAGTCAGCA
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTAGTCTGC
NTTGGCANN-----
 A C G T C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGGCTAGTCTGC-----
-NNTNNTGTCTGGNNTNG
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TTGGCTAGTCTGC---
------GGTCTGGCAT
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTGGCTAGTCTGC
TTGGCA-------
 C A G T G A C T A T C G A C T G A G T C A C G T G T C A A C T G A G C T A G T C C G A T A C T G A T G C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T