Information for 8-TGDCCATCTAMCA (Motif 19)

A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G G A C T C G T A C T A G G C T A A C G T C T A G A C T G G T A C A G T C C G T A
p-value:1e-8
log p-value:-1.902e+01
Information Content per bp:1.756
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.0 +/- 23.9bp
Average Position of motif in Background49.7 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGDCCATCTAMCA---
CGACCAACTGCCATGC
 A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGDCCATCTAMCA
TTGGCATGGTGCCA
 A C G T A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGDCCATCTAMCA
---CCAACTGCCA
 A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGDCCATCTAMCA-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGDCCATCTAMCA
--GCCATCTGTT-
 A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGDCCATCTAMCA--
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGDCCATCTAMCA
-RGCCATYAATCA
 A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGDCCATCTAMCA
CTGGCAGNCTGCCA
 A C G T A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGDCCATCTAMCA
-----ARNTGACA
 A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGDCCATCTAMCA
--ACCATCTGTT-
 A C G T A C T G C A T G G T A C A G T C C G T A C A G T A G T C A C G T C T G A G T A C G T A C C G T A
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T