Information for 5-CAGAGATCTT (Motif 18)

G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T
Reverse Opposite:
C T G A C G T A T C A G G C T A G C A T T A G C G C A T T A G C C G A T C A T G
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.677
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif7.18%
Number of Background Sequences with motif1286.0
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets52.2 +/- 27.3bp
Average Position of motif in Background49.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGATCTT----
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGATCTT
GCAGTGATTT-
 A C G T G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGATCTT
TGCTGTGATTT-
 A C G T A C G T G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGAGATCTT-
--NACATCTTN
 G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T A C G T
A C G T A C G T C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGAGATCTT
CNGTGATTTN
 G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGAGATCTT
--GTGACCTT
 G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGATCTT
GGTTAGAGACCT-
 A C G T A C G T A C G T G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGATCTT-
TAAGGCGTCTTG
 A C G T G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGATCTT-
GCNGCCATCTTG
 A C G T G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGATCTT-
CCTTTGATCTTT
 A C G T G T A C C G T A A T C G C G T A A T C G C G T A C A G T A G T C C G A T G A C T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T