Information for 4-AGATTCGTAA (Motif 9)

C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 27.3bp
Average Position of motif in Background32.2 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AGATTCGTAA--
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGATTCGTAA---
--AGTCGTAAAAA
 C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGATTCGTAA-----
TAAAGTCGTAAAATAG
 A C G T C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGATTCGTAA-----
TAAAGTCGTAAAACAT
 A C G T C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGATTCGTAA------
CAAGGTCGTAAAATCTT
 A C G T C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGATTCGTAA---
--GGTCGTAAAAA
 C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGATTCGTAA------
TTAGGTCGTAAAATTTC
 A C G T C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGATTCGTAA------
TAAGGTCGTAAAATCCT
 A C G T C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGATTCGTAA-----
TAAAGTCGTAAAACGT
 A C G T C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGATTCGTAA---
--GGTCGTAAAAT
 C G T A A C T G C G T A C G A T A C G T A G T C A C T G A C G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T