Information for 6-TTCAAAAATWTAT (Motif 12)

A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G A T C G T A C G A T C G A T A G C T G C A T A C G T C T A G C T G A C G T A
p-value:1e-7
log p-value:-1.691e+01
Information Content per bp:1.817
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif48.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets62.2 +/- 11.3bp
Average Position of motif in Background44.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAAAATWTAT
NATTCAAAT------
 A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAATWTAT
CGGTTTCAAA-------
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAATWTAT
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAATWTAT--
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAATWTAT
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAATWTAT
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAATWTAT--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TTCAAAAATWTAT
AATCAATTCAATAATT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAAAATWTAT
TATAGATCAAAGGAAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTCAAAAATWTAT
DCYAAAAATAGM-
 A C G T A G C T A G T C C G T A C G T A C T G A C G T A C G T A C G A T C G T A C G A T T C G A A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T