Information for 3-AYAYARATMTGATKAG (Motif 6)

C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T G T A C C G T A A C G T A G T C C G T A A C G T C T G A A C G T A G C T A C G T C T A G C G A T C T A G A C G T
p-value:1e-9
log p-value:-2.157e+01
Information Content per bp:1.861
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.3 +/- 17.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AYAYARATMTGATKAG-----
----TAAACTGATAAGAAGAT
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AYAYARATMTGATKAG
----TAATYNRATTAR
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AYAYARATMTGATKAG---
----AAAWWTGCTGACWWD
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AYAYARATMTGATKAG
---GTAATCDGATTA-
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AYAYARATMTGATKAG----
---CAAAGCTAATTAGNTTN
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0058.1_Hoxb3/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AYAYARATMTGATKAG-----
----TGAGCTAATTAGTTGGA
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AYAYARATMTGATKAG-----
----AAACATAATGAGGTTGC
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0105.1_Arid3a_2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AYAYARATMTGATKAG---
----NNATNTGATANNNNN
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PH0031.1_Evx1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AYAYARATMTGATKAG-----
----AGAACTAATTAGTGGAC
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AYAYARATMTGATKAG
-----AAGAGGATTAG
 C G T A A G T C C G T A A G T C G T C A T C A G C G T A A G C T G T C A A C G T A C T G C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G